Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.37□□□□□ -0.11
Upk1aQ9D132 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 AA414768-201ENSMUST00000121924 1257 ntBASIC14.37□□□□□ -0.11
Upk1aQ9D132 Olfr129-201ENSMUST00000122318 993 ntBASIC14.37□□□□□ -0.11
Upk1aQ9D132 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Upk1aQ9D132 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.37□□□□□ -0.11
Upk1aQ9D132 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.36□□□□□ -0.11
Upk1aQ9D132 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.35□□□□□ -0.11
Upk1aQ9D132 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.35□□□□□ -0.11
Upk1aQ9D132 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk1aQ9D132 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Gm9172-201ENSMUST00000212092 954 ntBASIC14.34□□□□□ -0.11
Upk1aQ9D132 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.34□□□□□ -0.11
Upk1aQ9D132 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Upk1aQ9D132 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.34□□□□□ -0.11
Upk1aQ9D132 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms