Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Gm25406-201ENSMUST00000157599 105 ntBASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Mir3081-201ENSMUST00000175305 84 ntBASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ska1Q9CPV1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Gm44454-201ENSMUST00000198541 138 ntBASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ska1Q9CPV1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms