Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Gm45328-201ENSMUST00000210942 917 ntBASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim8Q99PJ2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Gm7284-201ENSMUST00000131667 944 ntBASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim8Q99PJ2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim8Q99PJ2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim8Q99PJ2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms