Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp1aQ921W0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp1aQ921W0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Gm12134-201ENSMUST00000122109 520 ntBASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Gm22697-201ENSMUST00000175194 63 ntBASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.36□□□□□ -0.27
Chmp1aQ921W0 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp1aQ921W0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms