Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Gm20553-201ENSMUST00000204205 844 ntBASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc5Q91XW9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Gm43474-201ENSMUST00000196415 774 ntBASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc5Q91XW9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 App-207ENSMUST00000227737 2827 ntBASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhgc5Q91XW9 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Mir6990-201ENSMUST00000183724 91 ntBASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgc5Q91XW9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms