Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Gm23547-201ENSMUST00000158210 271 ntBASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Gm10013-201ENSMUST00000106074 672 ntBASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Gm45328-201ENSMUST00000210942 917 ntBASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40bQ8VHP8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Celf4-206ENSMUST00000224553 1729 ntBASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Gm5587-201ENSMUST00000206270 674 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms