Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne4Q8CII8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Gm24694-201ENSMUST00000180054 110 ntBASIC17.04■□□□□ 0.32
Syne4Q8CII8 Gm27663-201ENSMUST00000184839 110 ntBASIC17.04■□□□□ 0.32
Syne4Q8CII8 Gm28631-201ENSMUST00000190740 334 ntBASIC17.04■□□□□ 0.32
Syne4Q8CII8 Gm29667-201ENSMUST00000190817 490 ntBASIC17.04■□□□□ 0.32
Syne4Q8CII8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.04■□□□□ 0.32
Syne4Q8CII8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne4Q8CII8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Gm43433-201ENSMUST00000196573 481 ntBASIC17.03■□□□□ 0.32
Syne4Q8CII8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.03■□□□□ 0.32
Syne4Q8CII8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Syne4Q8CII8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.02■□□□□ 0.32
Syne4Q8CII8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.02■□□□□ 0.32
Syne4Q8CII8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.02■□□□□ 0.32
Syne4Q8CII8 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.02■□□□□ 0.32
Syne4Q8CII8 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.02■□□□□ 0.32
Syne4Q8CII8 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.02■□□□□ 0.32
Syne4Q8CII8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne4Q8CII8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syne4Q8CII8 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.02■□□□□ 0.31
Syne4Q8CII8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syne4Q8CII8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Syne4Q8CII8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syne4Q8CII8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syne4Q8CII8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syne4Q8CII8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syne4Q8CII8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syne4Q8CII8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syne4Q8CII8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.01■□□□□ 0.31
Syne4Q8CII8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Syne4Q8CII8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.01■□□□□ 0.31
Syne4Q8CII8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.01■□□□□ 0.31
Syne4Q8CII8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Syne4Q8CII8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syne4Q8CII8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms