Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd4Q8CC84 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Gm10231-201ENSMUST00000181584 441 ntBASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Gm10175-202ENSMUST00000208752 441 ntBASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd4Q8CC84 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lysmd4Q8CC84 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lysmd4Q8CC84 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lysmd4Q8CC84 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lysmd4Q8CC84 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Gm25016-201ENSMUST00000158399 131 ntBASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Lysmd4Q8CC84 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Gm11950-201ENSMUST00000121615 838 ntBASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Gm45328-201ENSMUST00000210942 917 ntBASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.57□□□□□ -0.24
Lysmd4Q8CC84 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms