Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Gm2651-201ENSMUST00000203560 838 ntBASIC15.34■□□□□ 0.05
Usp43Q8BUM9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp43Q8BUM9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp43Q8BUM9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.33■□□□□ 0.04
Usp43Q8BUM9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Gm18246-201ENSMUST00000221023 728 ntBASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Mzt1-203ENSMUST00000227948 952 ntBASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp43Q8BUM9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Gm43767-201ENSMUST00000198933 381 ntBASIC15.32■□□□□ 0.04
Usp43Q8BUM9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Efs-202ENSMUST00000227037 2540 ntBASIC15.32■□□□□ 0.04
Usp43Q8BUM9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.31■□□□□ 0.04
Usp43Q8BUM9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.31■□□□□ 0.04
Usp43Q8BUM9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Gm7461-201ENSMUST00000058918 827 ntBASIC15.31■□□□□ 0.04
Usp43Q8BUM9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms