Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Psmb5-202ENSMUST00000227257 622 ntBASIC15.42■□□□□ 0.06
Sfr1Q8BP27 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sfr1Q8BP27 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Gm4899-201ENSMUST00000178708 719 ntBASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.41■□□□□ 0.06
Sfr1Q8BP27 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Sfr1Q8BP27 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Gm14140-201ENSMUST00000119999 995 ntBASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Gm43514-201ENSMUST00000198852 424 ntBASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sfr1Q8BP27 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sfr1Q8BP27 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms