Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Gm10355-201ENSMUST00000097146 517 ntBASIC16.21■□□□□ 0.19
Nucks1Q80XU3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nucks1Q80XU3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nucks1Q80XU3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nucks1Q80XU3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nucks1Q80XU3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.19■□□□□ 0.18
Nucks1Q80XU3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nucks1Q80XU3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Efs-202ENSMUST00000227037 2540 ntBASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Gm11780-201ENSMUST00000136880 516 ntBASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Ank2-226ENSMUST00000189368 339 ntBASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nucks1Q80XU3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms