Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim27Q62158 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim27Q62158 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim27Q62158 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim27Q62158 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Trim27Q62158 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim27Q62158 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim27Q62158 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Trim27Q62158 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim27Q62158 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim27Q62158 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.58■□□□□ 0.56
Trim27Q62158 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.58■□□□□ 0.56
Trim27Q62158 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
Trim27Q62158 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim27Q62158 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim27Q62158 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.58■□□□□ 0.56
Trim27Q62158 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.58■□□□□ 0.56
Trim27Q62158 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim27Q62158 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim27Q62158 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.57■□□□□ 0.56
Trim27Q62158 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim27Q62158 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim27Q62158 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim27Q62158 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim27Q62158 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim27Q62158 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Trim27Q62158 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.56■□□□□ 0.56
Trim27Q62158 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
Trim27Q62158 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim27Q62158 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim27Q62158 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim27Q62158 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim27Q62158 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Trim27Q62158 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.55■□□□□ 0.56
Trim27Q62158 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Trim27Q62158 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Trim27Q62158 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.55■□□□□ 0.56
Trim27Q62158 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.55■□□□□ 0.56
Trim27Q62158 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim27Q62158 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim27Q62158 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim27Q62158 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim27Q62158 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.55■□□□□ 0.56
Trim27Q62158 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim27Q62158 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim27Q62158 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim27Q62158 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms