Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col12a1Q60847 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.75□□□□□ -0.05
Col12a1Q60847 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col12a1Q60847 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col12a1Q60847 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.74□□□□□ -0.05
Col12a1Q60847 Gm2495-201ENSMUST00000191160 466 ntBASIC14.74□□□□□ -0.05
Col12a1Q60847 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.74□□□□□ -0.05
Col12a1Q60847 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.74□□□□□ -0.05
Col12a1Q60847 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Gm37466-201ENSMUST00000195692 652 ntBASIC14.74□□□□□ -0.05
Col12a1Q60847 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col12a1Q60847 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.74□□□□□ -0.05
Col12a1Q60847 Gm19220-201ENSMUST00000222682 803 ntBASIC14.74□□□□□ -0.05
Col12a1Q60847 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col12a1Q60847 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col12a1Q60847 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.73□□□□□ -0.05
Col12a1Q60847 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col12a1Q60847 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.73□□□□□ -0.05
Col12a1Q60847 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Col12a1Q60847 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.73□□□□□ -0.05
Col12a1Q60847 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Col12a1Q60847 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col12a1Q60847 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col12a1Q60847 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.73□□□□□ -0.05
Col12a1Q60847 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col12a1Q60847 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm29310-201ENSMUST00000185468 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21825-201ENSMUST00000185728 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm29109-201ENSMUST00000185895 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21896-201ENSMUST00000186520 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21873-201ENSMUST00000186728 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21794-201ENSMUST00000187056 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21880-201ENSMUST00000187275 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21826-201ENSMUST00000187451 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21198-201ENSMUST00000188393 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21749-201ENSMUST00000189343 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21901-201ENSMUST00000189568 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm29424-201ENSMUST00000189716 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm28599-201ENSMUST00000189838 694 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21867-201ENSMUST00000189917 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm29269-201ENSMUST00000190087 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21722-201ENSMUST00000190153 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm28423-201ENSMUST00000190701 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21899-201ENSMUST00000190745 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21910-201ENSMUST00000191163 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21849-201ENSMUST00000191571 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm28678-201ENSMUST00000191593 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm20910-201ENSMUST00000193268 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm21871-201ENSMUST00000194621 696 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm5356-201ENSMUST00000093326 615 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col12a1Q60847 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.72□□□□□ -0.05
Col12a1Q60847 Gm16570-201ENSMUST00000161951 436 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms