Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.09■□□□□ 0.17
Trim43aQ3TL54 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43aQ3TL54 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43aQ3TL54 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43aQ3TL54 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43aQ3TL54 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Gm15794-201ENSMUST00000120182 631 ntBASIC16.07■□□□□ 0.16
Trim43aQ3TL54 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43aQ3TL54 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Mir3081-201ENSMUST00000175305 84 ntBASIC16.06■□□□□ 0.16
Trim43aQ3TL54 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43aQ3TL54 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43aQ3TL54 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms