Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smarcc1P97496 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smarcc1P97496 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarcc1P97496 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.86■□□□□ 0.61
Smarcc1P97496 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarcc1P97496 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smarcc1P97496 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarcc1P97496 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smarcc1P97496 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc1P97496 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.85■□□□□ 0.61
Smarcc1P97496 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.85■□□□□ 0.61
Smarcc1P97496 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Gm14928-201ENSMUST00000120198 477 ntBASIC18.85■□□□□ 0.61
Smarcc1P97496 Gm15321-201ENSMUST00000121290 288 ntBASIC18.85■□□□□ 0.61
Smarcc1P97496 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smarcc1P97496 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc1P97496 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smarcc1P97496 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smarcc1P97496 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Smarcc1P97496 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.84■□□□□ 0.61
Smarcc1P97496 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.84■□□□□ 0.61
Smarcc1P97496 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarcc1P97496 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smarcc1P97496 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smarcc1P97496 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smarcc1P97496 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc1P97496 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smarcc1P97496 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc1P97496 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc1P97496 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc1P97496 Gm12859-201ENSMUST00000117834 427 ntBASIC18.83■□□□□ 0.6
Smarcc1P97496 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc1P97496 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Smarcc1P97496 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.83■□□□□ 0.6
Smarcc1P97496 Gm18187-201ENSMUST00000196476 984 ntBASIC18.83■□□□□ 0.6
Smarcc1P97496 Gm6218-201ENSMUST00000219812 628 ntBASIC18.83■□□□□ 0.6
Smarcc1P97496 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc1P97496 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc1P97496 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc1P97496 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc1P97496 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smarcc1P97496 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Gm24543-201ENSMUST00000103867 82 ntBASIC18.82■□□□□ 0.6
Smarcc1P97496 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.82■□□□□ 0.6
Smarcc1P97496 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms