Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim43cP86449 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.47■□□□□ 0.23
Trim43cP86449 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim43cP86449 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim43cP86449 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.46■□□□□ 0.23
Trim43cP86449 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.46■□□□□ 0.23
Trim43cP86449 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.46■□□□□ 0.23
Trim43cP86449 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Trim43cP86449 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim43cP86449 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim43cP86449 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim43cP86449 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim43cP86449 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.46■□□□□ 0.23
Trim43cP86449 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim43cP86449 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim43cP86449 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim43cP86449 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trim43cP86449 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim43cP86449 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.45■□□□□ 0.22
Trim43cP86449 Gm43767-201ENSMUST00000198933 381 ntBASIC16.45■□□□□ 0.22
Trim43cP86449 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim43cP86449 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim43cP86449 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim43cP86449 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Trim43cP86449 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim43cP86449 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim43cP86449 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim43cP86449 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim43cP86449 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim43cP86449 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.44■□□□□ 0.22
Trim43cP86449 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.44■□□□□ 0.22
Trim43cP86449 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.44■□□□□ 0.22
Trim43cP86449 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim43cP86449 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim43cP86449 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim43cP86449 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim43cP86449 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim43cP86449 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Trim43cP86449 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.43■□□□□ 0.22
Trim43cP86449 Gm1401-201ENSMUST00000122048 772 ntBASIC16.43■□□□□ 0.22
Trim43cP86449 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim43cP86449 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms