Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Gm12008-201ENSMUST00000117791 755 ntBASIC11.78□□□□□ -0.52
Pfn1P62962 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.78□□□□□ -0.52
Pfn1P62962 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.78□□□□□ -0.52
Pfn1P62962 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Pfn1P62962 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.78□□□□□ -0.52
Pfn1P62962 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pfn1P62962 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfn1P62962 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Pfn1P62962 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Pfn1P62962 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
Pfn1P62962 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfn1P62962 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.77□□□□□ -0.53
Pfn1P62962 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pfn1P62962 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.77□□□□□ -0.53
Pfn1P62962 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.77□□□□□ -0.53
Pfn1P62962 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfn1P62962 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pfn1P62962 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.76□□□□□ -0.53
Pfn1P62962 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.76□□□□□ -0.53
Pfn1P62962 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Pfn1P62962 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.76□□□□□ -0.53
Pfn1P62962 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pfn1P62962 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.76□□□□□ -0.53
Pfn1P62962 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pfn1P62962 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.76□□□□□ -0.53
Pfn1P62962 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.76□□□□□ -0.53
Pfn1P62962 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pfn1P62962 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Pfn1P62962 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Pfn1P62962 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfn1P62962 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Pfn1P62962 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfn1P62962 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms