Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Vps33bP59016 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.93■□□□□ 0.62
Vps33bP59016 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.93■□□□□ 0.62
Vps33bP59016 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Gm5354-201ENSMUST00000182417 973 ntBASIC18.93■□□□□ 0.62
Vps33bP59016 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.93■□□□□ 0.62
Vps33bP59016 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Vps33bP59016 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33bP59016 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Vps33bP59016 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vps33bP59016 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vps33bP59016 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.92■□□□□ 0.62
Vps33bP59016 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.92■□□□□ 0.62
Vps33bP59016 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.92■□□□□ 0.62
Vps33bP59016 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Gm28911-201ENSMUST00000188837 117 ntBASIC18.92■□□□□ 0.62
Vps33bP59016 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.92■□□□□ 0.62
Vps33bP59016 Gm2451-201ENSMUST00000199447 999 ntBASIC18.92■□□□□ 0.62
Vps33bP59016 Gm10290-201ENSMUST00000200451 999 ntBASIC18.92■□□□□ 0.62
Vps33bP59016 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vps33bP59016 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vps33bP59016 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Vps33bP59016 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33bP59016 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps33bP59016 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps33bP59016 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.91■□□□□ 0.62
Vps33bP59016 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.91■□□□□ 0.62
Vps33bP59016 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.91■□□□□ 0.62
Vps33bP59016 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Vps33bP59016 Gm8749-201ENSMUST00000117737 331 ntBASIC18.91■□□□□ 0.62
Vps33bP59016 Gm11425-201ENSMUST00000119608 498 ntBASIC18.91■□□□□ 0.62
Vps33bP59016 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.91■□□□□ 0.62
Vps33bP59016 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.91■□□□□ 0.62
Vps33bP59016 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Gm9396-201ENSMUST00000076703 567 ntBASIC18.91■□□□□ 0.62
Vps33bP59016 Mir125a-201ENSMUST00000083545 68 ntBASIC18.91■□□□□ 0.62
Vps33bP59016 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.91■□□□□ 0.62
Vps33bP59016 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.91■□□□□ 0.62
Vps33bP59016 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33bP59016 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Mir1982-201ENSMUST00000157368 74 ntBASIC18.9■□□□□ 0.62
Vps33bP59016 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Vps33bP59016 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33bP59016 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps33bP59016 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Vps33bP59016 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33bP59016 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33bP59016 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33bP59016 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33bP59016 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.89■□□□□ 0.61
Vps33bP59016 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms