Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.34■□□□□ 0.05
Ddx6P54823 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ddx6P54823 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.34■□□□□ 0.05
Ddx6P54823 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ddx6P54823 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Ddx6P54823 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Ddx6P54823 Gm27920-201ENSMUST00000183953 96 ntBASIC15.34■□□□□ 0.05
Ddx6P54823 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ddx6P54823 Gm18049-201ENSMUST00000208909 581 ntBASIC15.34■□□□□ 0.05
Ddx6P54823 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ddx6P54823 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.34■□□□□ 0.05
Ddx6P54823 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ddx6P54823 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Ddx6P54823 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx6P54823 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.34■□□□□ 0.05
Ddx6P54823 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.33■□□□□ 0.05
Ddx6P54823 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx6P54823 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.33■□□□□ 0.05
Ddx6P54823 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx6P54823 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
Ddx6P54823 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ddx6P54823 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx6P54823 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.33■□□□□ 0.04
Ddx6P54823 Gm27622-201ENSMUST00000183779 60 ntBASIC15.33■□□□□ 0.04
Ddx6P54823 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ddx6P54823 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ddx6P54823 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ddx6P54823 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx6P54823 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx6P54823 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.32■□□□□ 0.04
Ddx6P54823 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.32■□□□□ 0.04
Ddx6P54823 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ddx6P54823 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx6P54823 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.32■□□□□ 0.04
Ddx6P54823 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ddx6P54823 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.32■□□□□ 0.04
Ddx6P54823 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Ddx6P54823 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.32■□□□□ 0.04
Ddx6P54823 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx6P54823 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx6P54823 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ddx6P54823 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ddx6P54823 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.31■□□□□ 0.04
Ddx6P54823 Gm6415-201ENSMUST00000118488 348 ntBASIC15.31■□□□□ 0.04
Ddx6P54823 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.31■□□□□ 0.04
Ddx6P54823 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.31■□□□□ 0.04
Ddx6P54823 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx6P54823 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx6P54823 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms