Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pdx1P52946 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.98□□□□□ -0.01
Pdx1P52946 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.98□□□□□ -0.01
Pdx1P52946 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.98□□□□□ -0.01
Pdx1P52946 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.98□□□□□ -0.01
Pdx1P52946 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.98□□□□□ -0.01
Pdx1P52946 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Psmb5-202ENSMUST00000227257 622 ntBASIC14.98□□□□□ -0.01
Pdx1P52946 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pdx1P52946 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.98□□□□□ -0.01
Pdx1P52946 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdx1P52946 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pdx1P52946 Celf4-206ENSMUST00000224553 1729 ntBASIC14.97□□□□□ -0.01
Pdx1P52946 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.97□□□□□ -0.01
Pdx1P52946 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.97□□□□□ -0.01
Pdx1P52946 Gm13597-201ENSMUST00000121239 375 ntBASIC14.97□□□□□ -0.01
Pdx1P52946 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.97□□□□□ -0.01
Pdx1P52946 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pdx1P52946 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.97□□□□□ -0.01
Pdx1P52946 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.97□□□□□ -0.01
Pdx1P52946 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdx1P52946 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pdx1P52946 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pdx1P52946 Gm14140-201ENSMUST00000119999 995 ntBASIC14.96□□□□□ -0.01
Pdx1P52946 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.96□□□□□ -0.01
Pdx1P52946 Gm5364-201ENSMUST00000216789 889 ntBASIC14.96□□□□□ -0.01
Pdx1P52946 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdx1P52946 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.96□□□□□ -0.01
Pdx1P52946 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.96□□□□□ -0.02
Pdx1P52946 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdx1P52946 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdx1P52946 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdx1P52946 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdx1P52946 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.95□□□□□ -0.02
Pdx1P52946 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.95□□□□□ -0.02
Pdx1P52946 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pdx1P52946 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Pdx1P52946 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pdx1P52946 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdx1P52946 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Pdx1P52946 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Pdx1P52946 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.95□□□□□ -0.02
Pdx1P52946 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms