Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Gm13616-201ENSMUST00000120600 222 ntBASIC14.31□□□□□ -0.12
Nkx2-6P43688 Gm11745-201ENSMUST00000121669 448 ntBASIC14.31□□□□□ -0.12
Nkx2-6P43688 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.31□□□□□ -0.12
Nkx2-6P43688 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.31□□□□□ -0.12
Nkx2-6P43688 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 App-207ENSMUST00000227737 2827 ntBASIC14.31□□□□□ -0.12
Nkx2-6P43688 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkx2-6P43688 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Mir6956-201ENSMUST00000183598 62 ntBASIC14.3□□□□□ -0.12
Nkx2-6P43688 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.3□□□□□ -0.12
Nkx2-6P43688 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Nkx2-6P43688 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.29□□□□□ -0.12
Nkx2-6P43688 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms