Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox18P43680 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox18P43680 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sox18P43680 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox18P43680 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Sox18P43680 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox18P43680 Gm18737-201ENSMUST00000173594 937 ntBASIC14.5□□□□□ -0.09
Sox18P43680 Gm25144-201ENSMUST00000179561 110 ntBASIC14.5□□□□□ -0.09
Sox18P43680 Gm25352-201ENSMUST00000179815 110 ntBASIC14.5□□□□□ -0.09
Sox18P43680 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.5□□□□□ -0.09
Sox18P43680 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.5□□□□□ -0.09
Sox18P43680 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.5□□□□□ -0.09
Sox18P43680 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sox18P43680 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Sox18P43680 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.5□□□□□ -0.09
Sox18P43680 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sox18P43680 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox18P43680 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sox18P43680 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox18P43680 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Sox18P43680 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox18P43680 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox18P43680 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Sox18P43680 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Gm2810-201ENSMUST00000118681 990 ntBASIC14.49□□□□□ -0.09
Sox18P43680 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox18P43680 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Sox18P43680 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.49□□□□□ -0.09
Sox18P43680 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sox18P43680 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.49□□□□□ -0.09
Sox18P43680 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox18P43680 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox18P43680 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sox18P43680 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Syt7-204ENSMUST00000223586 1344 ntBASIC14.48□□□□□ -0.09
Sox18P43680 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sox18P43680 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox18P43680 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox18P43680 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sox18P43680 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms