Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm25144-201ENSMUST00000179561 110 ntBASIC13.95□□□□□ -0.18
Sftpa1P35242 Gm25352-201ENSMUST00000179815 110 ntBASIC13.95□□□□□ -0.18
Sftpa1P35242 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.95□□□□□ -0.18
Sftpa1P35242 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.95□□□□□ -0.18
Sftpa1P35242 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.95□□□□□ -0.18
Sftpa1P35242 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.95□□□□□ -0.18
Sftpa1P35242 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Syt7-204ENSMUST00000223586 1344 ntBASIC13.94□□□□□ -0.18
Sftpa1P35242 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.94□□□□□ -0.18
Sftpa1P35242 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sftpa1P35242 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.94□□□□□ -0.18
Sftpa1P35242 Gm12490-201ENSMUST00000120255 560 ntBASIC13.94□□□□□ -0.18
Sftpa1P35242 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.94□□□□□ -0.18
Sftpa1P35242 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.94□□□□□ -0.18
Sftpa1P35242 Gm27920-201ENSMUST00000183953 96 ntBASIC13.94□□□□□ -0.18
Sftpa1P35242 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.94□□□□□ -0.18
Sftpa1P35242 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sftpa1P35242 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.94□□□□□ -0.18
Sftpa1P35242 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sftpa1P35242 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sftpa1P35242 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sftpa1P35242 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.94□□□□□ -0.18
Sftpa1P35242 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sftpa1P35242 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.93□□□□□ -0.18
Sftpa1P35242 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sftpa1P35242 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sftpa1P35242 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Sftpa1P35242 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Gm14767-201ENSMUST00000121559 586 ntBASIC13.93□□□□□ -0.18
Sftpa1P35242 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Gm7775-201ENSMUST00000218871 853 ntBASIC13.93□□□□□ -0.18
Sftpa1P35242 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.93□□□□□ -0.18
Sftpa1P35242 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.93□□□□□ -0.18
Sftpa1P35242 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.93□□□□□ -0.18
Sftpa1P35242 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.93□□□□□ -0.18
Sftpa1P35242 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Sftpa1P35242 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sftpa1P35242 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.92□□□□□ -0.18
Sftpa1P35242 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Sftpa1P35242 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sftpa1P35242 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.92□□□□□ -0.18
Sftpa1P35242 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Sftpa1P35242 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Gm14928-201ENSMUST00000120198 477 ntBASIC13.92□□□□□ -0.18
Sftpa1P35242 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms