Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Pde6aP27664 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.54■□□□□ 0.4
Pde6aP27664 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Pde6aP27664 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pde6aP27664 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.54■□□□□ 0.4
Pde6aP27664 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.54■□□□□ 0.4
Pde6aP27664 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.54■□□□□ 0.4
Pde6aP27664 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.54■□□□□ 0.4
Pde6aP27664 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.54■□□□□ 0.4
Pde6aP27664 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Pde6aP27664 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Pde6aP27664 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Pde6aP27664 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6aP27664 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.53■□□□□ 0.4
Pde6aP27664 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pde6aP27664 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Gm16198-201ENSMUST00000118766 670 ntBASIC17.53■□□□□ 0.4
Pde6aP27664 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.53■□□□□ 0.4
Pde6aP27664 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.53■□□□□ 0.4
Pde6aP27664 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.53■□□□□ 0.4
Pde6aP27664 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.53■□□□□ 0.4
Pde6aP27664 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.53■□□□□ 0.4
Pde6aP27664 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pde6aP27664 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6aP27664 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.52■□□□□ 0.4
Pde6aP27664 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pde6aP27664 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.52■□□□□ 0.4
Pde6aP27664 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.52■□□□□ 0.4
Pde6aP27664 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.52■□□□□ 0.4
Pde6aP27664 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pde6aP27664 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.52■□□□□ 0.4
Pde6aP27664 Gm5264-201ENSMUST00000190584 848 ntBASIC17.52■□□□□ 0.4
Pde6aP27664 Thap2-203ENSMUST00000218989 527 ntBASIC17.52■□□□□ 0.4
Pde6aP27664 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Pde6aP27664 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6aP27664 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pde6aP27664 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.52■□□□□ 0.39
Pde6aP27664 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6aP27664 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pde6aP27664 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6aP27664 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms