Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nfkb1P25799 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nfkb1P25799 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nfkb1P25799 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.54■□□□□ 0.08
Nfkb1P25799 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.54■□□□□ 0.08
Nfkb1P25799 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.54■□□□□ 0.08
Nfkb1P25799 Gm10154-201ENSMUST00000084445 354 ntBASIC15.54■□□□□ 0.08
Nfkb1P25799 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.54■□□□□ 0.08
Nfkb1P25799 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.54■□□□□ 0.08
Nfkb1P25799 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Nfkb1P25799 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nfkb1P25799 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Gm44335-201ENSMUST00000196879 141 ntBASIC15.53■□□□□ 0.08
Nfkb1P25799 Gm44297-201ENSMUST00000198304 141 ntBASIC15.53■□□□□ 0.08
Nfkb1P25799 Gm44346-201ENSMUST00000198851 141 ntBASIC15.53■□□□□ 0.08
Nfkb1P25799 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.53■□□□□ 0.08
Nfkb1P25799 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.53■□□□□ 0.08
Nfkb1P25799 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nfkb1P25799 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.53■□□□□ 0.08
Nfkb1P25799 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Nfkb1P25799 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Nfkb1P25799 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Nfkb1P25799 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Nfkb1P25799 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nfkb1P25799 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.52■□□□□ 0.08
Nfkb1P25799 Gm2272-201ENSMUST00000194903 582 ntBASIC15.52■□□□□ 0.08
Nfkb1P25799 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.52■□□□□ 0.08
Nfkb1P25799 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.52■□□□□ 0.08
Nfkb1P25799 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.52■□□□□ 0.08
Nfkb1P25799 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nfkb1P25799 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nfkb1P25799 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nfkb1P25799 App-207ENSMUST00000227737 2827 ntBASIC15.52■□□□□ 0.07
Nfkb1P25799 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nfkb1P25799 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nfkb1P25799 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nfkb1P25799 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nfkb1P25799 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.51■□□□□ 0.07
Nfkb1P25799 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nfkb1P25799 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Nfkb1P25799 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nfkb1P25799 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nfkb1P25799 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nfkb1P25799 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.51■□□□□ 0.07
Nfkb1P25799 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nfkb1P25799 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nfkb1P25799 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nfkb1P25799 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nfkb1P25799 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nfkb1P25799 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms