Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctla2aP12399 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctla2aP12399 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ctla2aP12399 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ctla2aP12399 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.67□□□□□ -0.22
Ctla2aP12399 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.67□□□□□ -0.22
Ctla2aP12399 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Gm27463-201ENSMUST00000183569 57 ntBASIC13.67□□□□□ -0.22
Ctla2aP12399 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.67□□□□□ -0.22
Ctla2aP12399 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.67□□□□□ -0.22
Ctla2aP12399 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ctla2aP12399 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ctla2aP12399 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctla2aP12399 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctla2aP12399 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.66□□□□□ -0.22
Ctla2aP12399 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.66□□□□□ -0.22
Ctla2aP12399 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctla2aP12399 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Gm12008-201ENSMUST00000117791 755 ntBASIC13.66□□□□□ -0.22
Ctla2aP12399 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.66□□□□□ -0.22
Ctla2aP12399 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.66□□□□□ -0.22
Ctla2aP12399 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctla2aP12399 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ctla2aP12399 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctla2aP12399 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Ctla2aP12399 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.66□□□□□ -0.22
Ctla2aP12399 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctla2aP12399 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ctla2aP12399 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ctla2aP12399 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ctla2aP12399 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Ctla2aP12399 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Gm10653-202ENSMUST00000139570 835 ntBASIC13.65□□□□□ -0.22
Ctla2aP12399 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.65□□□□□ -0.22
Ctla2aP12399 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.65□□□□□ -0.22
Ctla2aP12399 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ctla2aP12399 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.65□□□□□ -0.22
Ctla2aP12399 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctla2aP12399 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms