Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Gm18246-201ENSMUST00000221023 728 ntBASIC13.15□□□□□ -0.3
PtcraP0C6B2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PtcraP0C6B2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PtcraP0C6B2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.14□□□□□ -0.31
PtcraP0C6B2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PtcraP0C6B2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PtcraP0C6B2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PtcraP0C6B2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.13□□□□□ -0.31
PtcraP0C6B2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.13□□□□□ -0.31
PtcraP0C6B2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms