Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.29□□□□□ -0.44
P06323 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.29□□□□□ -0.44
P06323 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P06323 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06323 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P06323 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.28□□□□□ -0.44
P06323 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.28□□□□□ -0.44
P06323 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
P06323 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P06323 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.28□□□□□ -0.44
P06323 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
P06323 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
P06323 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
P06323 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.28□□□□□ -0.44
P06323 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
P06323 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.28□□□□□ -0.44
P06323 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P06323 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.28□□□□□ -0.44
P06323 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
P06323 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
P06323 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.28□□□□□ -0.44
P06323 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06323 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06323 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06323 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06323 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P06323 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.27□□□□□ -0.44
P06323 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.27□□□□□ -0.44
P06323 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P06323 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06323 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
P06323 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
P06323 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
P06323 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
P06323 Gm14722-201ENSMUST00000118943 689 ntBASIC12.27□□□□□ -0.45
P06323 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
P06323 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
P06323 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
P06323 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
P06323 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.27□□□□□ -0.45
P06323 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
P06323 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.27□□□□□ -0.45
P06323 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
P06323 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
P06323 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P06323 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
P06323 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P06323 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms