Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.73□□□□□ -0.21
Abcd4O89016 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Abcd4O89016 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.73□□□□□ -0.21
Abcd4O89016 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.73□□□□□ -0.21
Abcd4O89016 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.73□□□□□ -0.21
Abcd4O89016 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.73□□□□□ -0.21
Abcd4O89016 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.73□□□□□ -0.21
Abcd4O89016 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.73□□□□□ -0.21
Abcd4O89016 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Abcd4O89016 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.73□□□□□ -0.21
Abcd4O89016 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.73□□□□□ -0.21
Abcd4O89016 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Abcd4O89016 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.72□□□□□ -0.21
Abcd4O89016 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Gm25925-201ENSMUST00000158314 306 ntBASIC13.72□□□□□ -0.21
Abcd4O89016 Gm17271-201ENSMUST00000165535 355 ntBASIC13.72□□□□□ -0.21
Abcd4O89016 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.72□□□□□ -0.21
Abcd4O89016 Gm43575-201ENSMUST00000196420 516 ntBASIC13.72□□□□□ -0.21
Abcd4O89016 Gm9682-201ENSMUST00000197505 556 ntBASIC13.72□□□□□ -0.21
Abcd4O89016 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.72□□□□□ -0.21
Abcd4O89016 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.72□□□□□ -0.21
Abcd4O89016 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd4O89016 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.71□□□□□ -0.21
Abcd4O89016 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Abcd4O89016 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Abcd4O89016 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.71□□□□□ -0.21
Abcd4O89016 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Abcd4O89016 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.71□□□□□ -0.21
Abcd4O89016 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 App-207ENSMUST00000227737 2827 ntBASIC13.71□□□□□ -0.21
Abcd4O89016 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Abcd4O89016 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.71□□□□□ -0.21
Abcd4O89016 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Abcd4O89016 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.71□□□□□ -0.21
Abcd4O89016 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.71□□□□□ -0.21
Abcd4O89016 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Abcd4O89016 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.71□□□□□ -0.21
Abcd4O89016 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Abcd4O89016 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd4O89016 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd4O89016 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd4O89016 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd4O89016 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd4O89016 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.71□□□□□ -0.22
Abcd4O89016 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd4O89016 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd4O89016 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd4O89016 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.7□□□□□ -0.22
Abcd4O89016 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd4O89016 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms