Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.04□□□□□ -0.16
Capns1O88456 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Efs-202ENSMUST00000227037 2540 ntBASIC14.04□□□□□ -0.16
Capns1O88456 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Gm18733-201ENSMUST00000173950 856 ntBASIC14.04□□□□□ -0.16
Capns1O88456 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.04□□□□□ -0.16
Capns1O88456 Mir6404-201ENSMUST00000183699 94 ntBASIC14.04□□□□□ -0.16
Capns1O88456 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.04□□□□□ -0.16
Capns1O88456 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.04□□□□□ -0.16
Capns1O88456 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Capns1O88456 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Capns1O88456 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.04□□□□□ -0.16
Capns1O88456 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Capns1O88456 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Capns1O88456 Gm37935-201ENSMUST00000192012 982 ntBASIC14.03□□□□□ -0.16
Capns1O88456 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.03□□□□□ -0.16
Capns1O88456 Gm43347-201ENSMUST00000200226 580 ntBASIC14.03□□□□□ -0.16
Capns1O88456 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.03□□□□□ -0.16
Capns1O88456 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Capns1O88456 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Capns1O88456 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Capns1O88456 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Capns1O88456 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Capns1O88456 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Capns1O88456 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Capns1O88456 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Capns1O88456 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Capns1O88456 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Capns1O88456 Gm27525-201ENSMUST00000184465 107 ntBASIC14.02□□□□□ -0.17
Capns1O88456 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.02□□□□□ -0.17
Capns1O88456 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Capns1O88456 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.02□□□□□ -0.17
Capns1O88456 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capns1O88456 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.01□□□□□ -0.17
Capns1O88456 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.01□□□□□ -0.17
Capns1O88456 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Capns1O88456 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.01□□□□□ -0.17
Capns1O88456 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.01□□□□□ -0.17
Capns1O88456 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.01□□□□□ -0.17
Capns1O88456 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.01□□□□□ -0.17
Capns1O88456 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.01□□□□□ -0.17
Capns1O88456 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capns1O88456 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms