Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.15□□□□□ -0.14
Tulp3O88413 Gm11950-201ENSMUST00000121615 838 ntBASIC14.15□□□□□ -0.14
Tulp3O88413 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.15□□□□□ -0.14
Tulp3O88413 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.15□□□□□ -0.14
Tulp3O88413 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.15□□□□□ -0.14
Tulp3O88413 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.15□□□□□ -0.14
Tulp3O88413 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tulp3O88413 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.15□□□□□ -0.14
Tulp3O88413 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.15□□□□□ -0.14
Tulp3O88413 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.15□□□□□ -0.14
Tulp3O88413 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.15□□□□□ -0.14
Tulp3O88413 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tulp3O88413 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tulp3O88413 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Tulp3O88413 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tulp3O88413 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Tulp3O88413 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tulp3O88413 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.14□□□□□ -0.15
Tulp3O88413 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.14□□□□□ -0.15
Tulp3O88413 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tulp3O88413 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tulp3O88413 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.14□□□□□ -0.15
Tulp3O88413 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.14□□□□□ -0.15
Tulp3O88413 Mir6982-201ENSMUST00000184354 68 ntBASIC14.14□□□□□ -0.15
Tulp3O88413 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.14□□□□□ -0.15
Tulp3O88413 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tulp3O88413 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tulp3O88413 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tulp3O88413 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.13□□□□□ -0.15
Tulp3O88413 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Tulp3O88413 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.13□□□□□ -0.15
Tulp3O88413 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Gm6345-202ENSMUST00000180900 204 ntBASIC14.13□□□□□ -0.15
Tulp3O88413 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.13□□□□□ -0.15
Tulp3O88413 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.13□□□□□ -0.15
Tulp3O88413 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Tulp3O88413 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Tulp3O88413 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tulp3O88413 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tulp3O88413 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tulp3O88413 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms