Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Prrt1O35449 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Prrt1O35449 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.83□□□□□ -0.36
Prrt1O35449 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prrt1O35449 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Prrt1O35449 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Prrt1O35449 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.82□□□□□ -0.36
Prrt1O35449 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.82□□□□□ -0.36
Prrt1O35449 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Prrt1O35449 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.82□□□□□ -0.36
Prrt1O35449 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Prrt1O35449 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.82□□□□□ -0.36
Prrt1O35449 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.82□□□□□ -0.36
Prrt1O35449 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.82□□□□□ -0.36
Prrt1O35449 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Prrt1O35449 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Prrt1O35449 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.82□□□□□ -0.36
Prrt1O35449 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Prrt1O35449 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prrt1O35449 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.81□□□□□ -0.36
Prrt1O35449 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Prrt1O35449 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Prrt1O35449 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Prrt1O35449 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.81□□□□□ -0.36
Prrt1O35449 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.81□□□□□ -0.36
Prrt1O35449 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.81□□□□□ -0.36
Prrt1O35449 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.81□□□□□ -0.36
Prrt1O35449 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Prrt1O35449 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Prrt1O35449 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Prrt1O35449 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prrt1O35449 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prrt1O35449 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prrt1O35449 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prrt1O35449 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Prrt1O35449 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prrt1O35449 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prrt1O35449 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prrt1O35449 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prrt1O35449 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prrt1O35449 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms