Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Alx4O35137 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.51□□□□□ -0.25
Alx4O35137 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.51□□□□□ -0.25
Alx4O35137 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.51□□□□□ -0.25
Alx4O35137 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Gm25745-201ENSMUST00000174945 133 ntBASIC13.51□□□□□ -0.25
Alx4O35137 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Alx4O35137 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Alx4O35137 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.51□□□□□ -0.25
Alx4O35137 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Alx4O35137 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Alx4O35137 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Alx4O35137 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Alx4O35137 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Alx4O35137 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.5□□□□□ -0.25
Alx4O35137 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Alx4O35137 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.5□□□□□ -0.25
Alx4O35137 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Alx4O35137 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.5□□□□□ -0.25
Alx4O35137 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.5□□□□□ -0.25
Alx4O35137 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Alx4O35137 Gm8655-201ENSMUST00000221159 852 ntBASIC13.5□□□□□ -0.25
Alx4O35137 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Alx4O35137 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Alx4O35137 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.5□□□□□ -0.25
Alx4O35137 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.5□□□□□ -0.25
Alx4O35137 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Alx4O35137 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Alx4O35137 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Alx4O35137 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Alx4O35137 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Alx4O35137 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Alx4O35137 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Alx4O35137 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Alx4O35137 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Alx4O35137 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Alx4O35137 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.49□□□□□ -0.25
Alx4O35137 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Gm15165-201ENSMUST00000118140 502 ntBASIC13.49□□□□□ -0.25
Alx4O35137 Gm4459-201ENSMUST00000118750 468 ntBASIC13.49□□□□□ -0.25
Alx4O35137 Olfr129-201ENSMUST00000122318 993 ntBASIC13.49□□□□□ -0.25
Alx4O35137 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Alx4O35137 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Alx4O35137 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Alx4O35137 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.49□□□□□ -0.25
Alx4O35137 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.49□□□□□ -0.25
Alx4O35137 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.49□□□□□ -0.25
Alx4O35137 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Alx4O35137 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms