Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndufb11O09111 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.16□□□□□ -0.46
Ndufb11O09111 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Gm13186-201ENSMUST00000118031 316 ntBASIC12.16□□□□□ -0.46
Ndufb11O09111 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.16□□□□□ -0.46
Ndufb11O09111 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.16□□□□□ -0.46
Ndufb11O09111 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Gm18025-201ENSMUST00000221733 862 ntBASIC12.16□□□□□ -0.46
Ndufb11O09111 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ndufb11O09111 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufb11O09111 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Ndufb11O09111 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.15□□□□□ -0.46
Ndufb11O09111 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.15□□□□□ -0.46
Ndufb11O09111 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Ndufb11O09111 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ndufb11O09111 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.15□□□□□ -0.46
Ndufb11O09111 Il3ra-202ENSMUST00000223589 738 ntBASIC12.15□□□□□ -0.46
Ndufb11O09111 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.15□□□□□ -0.46
Ndufb11O09111 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufb11O09111 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndufb11O09111 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndufb11O09111 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndufb11O09111 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndufb11O09111 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndufb11O09111 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.14□□□□□ -0.47
Ndufb11O09111 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ndufb11O09111 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ndufb11O09111 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.14□□□□□ -0.47
Ndufb11O09111 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.14□□□□□ -0.47
Ndufb11O09111 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.14□□□□□ -0.47
Ndufb11O09111 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufb11O09111 Gm12382-201ENSMUST00000122005 922 ntBASIC12.14□□□□□ -0.47
Ndufb11O09111 Gm6211-202ENSMUST00000167849 925 ntBASIC12.14□□□□□ -0.47
Ndufb11O09111 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms