Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc71lE9Q4T4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Gm9013-201ENSMUST00000132939 882 ntBASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc71lE9Q4T4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 Gm43799-201ENSMUST00000201845 579 ntBASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc71lE9Q4T4 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms