Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a3E9PWQ3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col6a3E9PWQ3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.89□□□□□ -0.03
Col6a3E9PWQ3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm11793-201ENSMUST00000120433 981 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm2383-201ENSMUST00000181461 807 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm29310-201ENSMUST00000185468 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21825-201ENSMUST00000185728 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm29109-201ENSMUST00000185895 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21896-201ENSMUST00000186520 696 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms