Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm11950-201ENSMUST00000121615 838 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm25406-201ENSMUST00000157599 105 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm8825-201ENSMUST00000182565 998 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm4518-201ENSMUST00000182638 718 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm45328-201ENSMUST00000210942 917 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms