Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm8825-201ENSMUST00000182565 998 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm4518-201ENSMUST00000182638 718 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms