Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-5A0A075B6B5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Gm12527-201ENSMUST00000117967 564 ntBASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-5A0A075B6B5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms