Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav6n-6A0A075B6B2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav6n-6A0A075B6B2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm27704-201ENSMUST00000185094 107 ntBASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm44430-201ENSMUST00000203376 995 ntBASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6n-6A0A075B6B2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6n-6A0A075B6B2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms