Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.9□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm6345-202ENSMUST00000180900 204 ntBASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms