Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Mir6404-201ENSMUST00000183699 94 ntBASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm3375-201ENSMUST00000203929 796 ntBASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm7370-201ENSMUST00000219471 767 ntBASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav16d-dv11A0A075B617 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav16d-dv11A0A075B617 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav16d-dv11A0A075B617 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav16d-dv11A0A075B617 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm13474-201ENSMUST00000122466 815 ntBASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav16d-dv11A0A075B617 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms