Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3aQ9JKX8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3aQ9JKX8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Upk3aQ9JKX8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Upk3aQ9JKX8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Upk3aQ9JKX8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Gm2272-201ENSMUST00000194903 582 ntBASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3aQ9JKX8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Gm11779-201ENSMUST00000118541 368 ntBASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Gm5177-201ENSMUST00000183092 997 ntBASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Gm17968-201ENSMUST00000194902 784 ntBASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk3aQ9JKX8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk3aQ9JKX8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Gm12260-201ENSMUST00000122447 411 ntBASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Upk3aQ9JKX8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms