Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Gm4875-201ENSMUST00000118257 786 ntBASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Gm5566-201ENSMUST00000116118 459 ntBASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.49■□□□□ 0.07
Nkx2-4Q9EQM3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Gm6266-201ENSMUST00000203844 806 ntBASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nkx2-4Q9EQM3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms