Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrc40Q9CRC8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrc40Q9CRC8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrc40Q9CRC8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Gm25990-201ENSMUST00000102440 86 ntBASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc40Q9CRC8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc40Q9CRC8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc40Q9CRC8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc40Q9CRC8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc40Q9CRC8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc40Q9CRC8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.08■□□□□ 0.01
Lrrc40Q9CRC8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc40Q9CRC8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Lrrc40Q9CRC8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Gm10499-201ENSMUST00000174094 934 ntBASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.08■□□□□ 0
Lrrc40Q9CRC8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Gm37153-201ENSMUST00000193637 231 ntBASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc40Q9CRC8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrc40Q9CRC8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrc40Q9CRC8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lrrc40Q9CRC8 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.06■□□□□ 0
Lrrc40Q9CRC8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrc40Q9CRC8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrc40Q9CRC8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrc40Q9CRC8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrc40Q9CRC8 Gm7222-201ENSMUST00000117512 906 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms