Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retreg3Q9CQV4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 AC155266.1-201ENSMUST00000220762 904 ntBASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg3Q9CQV4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg3Q9CQV4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms