Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.11□□□□□ -0.15
Cdca3Q99M54 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.11□□□□□ -0.15
Cdca3Q99M54 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.11□□□□□ -0.15
Cdca3Q99M54 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdca3Q99M54 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Gm8655-201ENSMUST00000221159 852 ntBASIC14.1□□□□□ -0.15
Cdca3Q99M54 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Rubie-203ENSMUST00000227803 2430 ntBASIC14.1□□□□□ -0.15
Cdca3Q99M54 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdca3Q99M54 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.09□□□□□ -0.15
Cdca3Q99M54 BC037039-201ENSMUST00000192003 2205 ntBASIC14.09□□□□□ -0.15
Cdca3Q99M54 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Mir3113-201ENSMUST00000175478 76 ntBASIC14.09□□□□□ -0.15
Cdca3Q99M54 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.09□□□□□ -0.15
Cdca3Q99M54 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdca3Q99M54 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms