Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha2Q91Y17 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha2Q91Y17 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Gm10154-201ENSMUST00000084445 354 ntBASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha2Q91Y17 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms