Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Gm8655-201ENSMUST00000221159 852 ntBASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb4Q91XZ6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb4Q91XZ6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Gm12644-201ENSMUST00000119935 606 ntBASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb4Q91XZ6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms