Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm27335-201ENSMUST00000184758 97 ntBASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb11Q91UZ8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Gm1401-201ENSMUST00000122048 772 ntBASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb11Q91UZ8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb11Q91UZ8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb11Q91UZ8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb11Q91UZ8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Pcdhb11Q91UZ8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhb11Q91UZ8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb11Q91UZ8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb11Q91UZ8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Gm44771-201ENSMUST00000206975 626 ntBASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb11Q91UZ8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Gm18246-201ENSMUST00000221023 728 ntBASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Psmb5-202ENSMUST00000227257 622 ntBASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb11Q91UZ8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms